Main
Tainá Rocha
Note: I use open-source tools and platforms. I am interested in good practices about open science (open databases, open software, etc.), good workflows, reproducibility and FAIR principles.
Education
PhD. in Zoology
Emílio Goeldi Museum
MPEG, Brazil
2017 - 2013
- DOCTORAL DISSERTATION: Phylogeographic of disjunct bird between Amazon and Atlantic Forest
MSc. in Environmental biology
Federal University of Pará
IECOS, Brazil
2012 - 2010
- MASTER THESIS: Phylogeographic analysis of Xiphorhynchus guttatus from Amazon and Atlantic Forest
Degree in biological science
Federal University of Pará
UFPA, Brazil
2010 - 2006
Complementary Training Courses
Flexdashboard: Interactive panels using R
Analyze. Share. Reproduce. Your data tells a story. Use rmarkdown and Flexdashboard and transform your analysis into high-quality documents, reports, presentations and dashboards.
Online
2021
Regular expressions (regex) for data cleaning and transforming
Regex as part of the data cleaning and transformation process using Tidyverse R packages.
Online
2021
Open Life Science program
OLS-2. Training for early stage researchers and young leaders interested in furthering their Open Science skills.
Online
2020
Research Experience
Independent research
Home Office
Home Office
2021 - 2021
- Forest under different scenarios of climate change
https://github.com/Tai-Rocha/Forest_Scenarios.github.io
Postdoctoral Researcher
Botanical Garden Research Institute
Supervisor: Marinez F Siqueira
JBRJ, Brazil
2021 - 2019
- Beta diversity in Caatinga dry tropical forest
https://github.com/Tai-Rocha/Caatinga_Dry_Forest.github.io - Climatic niche analysis for Syzygiella rubricaulis (Bryophytes)
https://github.com/Tai-Rocha/S_rubricaulis_bryophytes - The first botanical explorations of bryophyte diversity in the Brazilian Amazon mountains: high species diversity, low endemism, and low similarity
https://github.com/Tai-Rocha/Bryophyte-Amazon-mountains - Ecological niche models with future projections for Dimorphandra wilsonii Rizzini (Fabaceae) presented to Green List in the three-year activity plan of the Brazilian Plant Red List Authority member of the Plant Conservation Commitee between 2017-2020 and the Species Survival Commission of the International Union for Conservation of Nature (IUCN)
https://github.com/Tai-Rocha/faveiro - Ferns and lycophytes diversity of Tijuca forest.
https://github.com/Tai-Rocha/Ferns-and-lycophytes
Researcher of Technological Development and Innovation
Ecology department
Supervisor: Mariana M Vale
UFRJ, Brazil
2019 - 2017
- Global land-use and land-cover (LULC) data under historical, current, and future climatic conditions
https://github.com/Tai-Rocha/LUH2_Data - Ecological niche models (ENMs) for Carpornis melanocephala (Passeriformes: Cotingidae) in Rio de Janeiro State,Brazil
https://github.com/Tai-Rocha/Carpornis_melanocephala - Ecological niche modeling and niche similarity test to compares two divergent lineages of Microtus californicus (Rodentia, Cricetidae)
https://github.com/Tai-Rocha/Vole
Teaching Experience
Instructor
Biology department
PUC-Rio, Brazil
2020 - 2019
- Ecological Niche Models and Species Distribution Models, theory and practice
- Public tools for spatial analysis of biodiversity
Guest Lecture
II National Meeting on Biological Collections and their Interfaces
IVB, Brazil
2020 - 2020
- Ecological niche models and biological conservation in future scenarios of global changes
Guest lecture.
Biological Sciences- Bachelor’s Degree
UVA, Brazil
2019 - 2018
- Ecological niche models under a biogeography perspective
- Ecological Niche Models and Species Distribution Models
Guest lecture
Biological Sciences- Bachelor’s Degree
UFRA, Brazil
2018 - 2017
- Introduction to Geographic Information System (GIS)
- Data for ecological niche models
Guest lecture
Biological Sciences Undergraduate
UNESA, Brazil
2017 - 2017
- Introduction to databases which provide input to perform ecological niche models
High school teacher
Dinâmica Natural
Rio de Janeiro, Brazil
2017 - 2015
- Science classes
Selected Publications
Global land-use and land-cover data: historical, current and future scenarios
Accepted for publication in Biodiversity Informatics Journal , available in bioRxiv
N/A
2021 - 2021
- Authored by Vale MM, Lima-Ribeiro MS and Rocha TC.
The first botanical explorations of bryophyte diversity in the Brazilian Amazon mountains: high species diversity, low endemism, and low similarity
N/A
2020 - 2020
- Authored by Costa D, Nada F.and Rocha TC.
A dynamic continental moisture gradient drove Amazonian bird diversification
N/A
2019 - 2019
- Authored by Silva SM , Townsend P, Carneiro L, Burlamaqui TCT, Ribas CC, Sousa-Neves T, Miranda LS, Fernandes AM, d’Horta FM, Araújo-Silva LC, Batista R, Bandeira CHMM, Dantas SM, Ferreira M, Martins DM, Oliveira J, Rocha TC, Sardelli CH, Gregory T, Rêgo PS, Santos MP, Sequeira F, Vallinoto M and Aleixo A.
A macroecological approach to evolutionary rescue and adaptation to climate change
N/A
2019 - 2019
- Authored by Diniz-Filho JAF, Souza KS, Bini LM, Loyola R, Dobrovolski R, Rodrigues JFM, Lima-Ribeiro Matheus MS, Terribile CL, RangelTF, Bione I, Freitas R, Machado IF, Rocha TC, Lorini ML, ValeMM, Navas CA, Maciel NM, Villalobos F, Olalla-Tarraga MA, Gouveia S.
Molecular phylogeny and diversification of a widespread Neotropical rainforest bird group: The Buff-throated Woodcreeper complex, Xiphorhynchus guttatus/susurrans (Aves: Dendrocolaptidae)
Molecular Phylogenetics and Evolution
N/A
2015 - 2015
- Authored by Rocha TC, Sequeira F, Aleixo A, Rego PS, Sampaio I, Schneider H, Vallinoto M.
Instabilidade Climática e diversidade de espécies na Amazônia
In book: Cenários para Amazônia: clima, biodiversidade e uso da terra
N/A
2014 - 2014
- Authored by Aleixo A, Townsend P, Araújo-Silva LC, Miléo CHM, Batista R, Burlamaqui TCT, Danta SM, Fernandes AM, Ferreira M, Martins DM, Rêgo PS, Ribas CC, Rocha TC, Santos MP, Sardelli CH, Sequeira F, Soares LMS, de Sousa BRS, Sousa SA, Sousa-Neves T, Gregory T, Vallinoto M.
Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
Genetics and Molecular Biology
N/A
2009 - 2009
- Authored by Rodrigues-Filho LF, Rocha TC, Rego PS, Schneider H, Sampaio I, Vallinoto M.
Member of Examination Committee
Leave out or put in - selecting input data to improve ecological niche models applied to conservation and climate change analysis: an approach using the Atlantic Goliath Grouper, Epinephelus itajara (Perciformes)
Final Master committee. Student: Eduardo Motta Carelli Minsky. Advisor: Maria Lucia Lorini. Institution: UNIRIO
UNIRIO, Brazil
2021
Wallacean knowledge shortfall of mammals inthe Central Corridor of the Atlantic Forest
Final undergraduate committee. Student: Inês Motta Comarella. Advisor: Francisco Candido Cardoso Barreto. Institution: UFES
UFES, Brazil
2021
Impacts on the food behavior of birds in the urban, semi-urban and rural environment in the municipal of Capanema, Pará
Final undergraduate committee. Student: Luana Gabriela Costa Bezerra. Advisor: Breno Barros. Institution: UFRA
UFRA, Brazil
2021
Modeling species dis-tribution of plant species as tool for assessing the impacts of climate changes andprogress of Sustainable Development Goals (SDGs) 13 and 15 in Caatinga biome
Master’s qualifying examination. Student: Lucas Peixoto Teixeira. Advisor: Marcelo Freire Moro. Institution: UFC
UFC, Brazil
2021
Strategies for conservationof endemic and threatened species: Hindsia glabra K.Schum E Aosa uleana (Urb.Gilg) Weigend
Master’s project monitoring committee. Student: Bárbara Piovani Luz Aieta Afonso. Supervisor: Marinez Ferreira de Siqueira. Institution: ENBT/JBRJ
ENBT, Brazil
2020
Seabird habitat use and its association offoraging with Guiana dolphin (Sotalia guianensis) in Sepetiba Bay (2018).
Undergraduate monitoring committee. Student:Leonardo Gomes Pacheco de Sá. Advisor: Maria Alice dos Santos Alves. Co-advisor: Rodrigo Hipolito Tardin Oliveira. Institution: UFRJ
UFRJ, Brazil
2018
Selected Talks & Scientific communication
I recently created a website.1 where I will talk about science communication, provide tutorials, other diverse themes about science career
Selected Events
V International Seminar on Statistics with R
V SER event was recognized by the R Foundation (2018) for its pioneering in Latin America in bringing together an expressive number of R users| Participation as a listener.
Online
2021
Forum of Rede Nacional de Ensino e Pesquisa
RNP 2019. Challenges of digital transformation in teaching and research will lead debates at 2019 RNP Forum| Participation as Guest speaker.
Brasília, Brazil
2019
list of abbreviations
UVA
Rio de Janeiro, Brazil
This resume was made with the R packages pagedown and datadrivencv.
Code available on GitHub.
Last updated on 2021-07-27. The most recent version of this resume is available here.